References:
|
||||||||||
We
develop a new program called HapTagger for the
selection of tag SNPs based on haplotypes instead of on a single SNP. The tag
SNPs found by HapTagger form a set of haplotypes
completely predictive of the alleles of all untyped
SNPs. HapTagger avoids the need of incorporating a
linkage disequilibrium statistic and thus significantly improves the
computational efficiency. The internal subroutine used by HapTagger
(called FastPerfectLD) which can efficiently
compute perfect LD and find tag SNPs based on pairwise LD is also available
for separate download.
If you encounter any problem, please contact Prof. Kun-Mao Chao.
|
This
site was last updated 01/05/09