WORST 20 GENES

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You may click on the icons in each table row to view the specific graph for that target gene ( clicking the blue icon will open up the estimated X v.s. observed X image, while the pink icon will open up the estimated Y v.s. observed Y image), or go to the Graphics section to view graphics in slideshow. Click on the yellow icon to see further explanations for definitions.

SUMMARY

 
Target ORF ( Gene Symbol )
log L
AIC

SSE
(sum of squre errors)

Fitted EquationExplanation
(Target = C0 + C1 regulator 1 + .... Cn regulator n)

estimated X vs observed Xestimated Y vs observed Y YBR089W(NA) -1.677690703 7.355381406 3.200061 YBR089W = -0.16638 + 0.36722 HAA1
estimated X vs observed Xestimated Y vs observed Y YDR285W(ZIP1) 0.768884787 2.462230426 3.691603 YDR285W = 0.19143 + -0.36821 INO2
estimated X vs observed Xestimated Y vs observed Y YFR057W(NA) 1.129506991 1.740986018 4.310447 YFR057W = 0.09878 + -0.18824 GCN4
estimated X vs observed Xestimated Y vs observed Y YAL018C(NA) 1.51914004 2.961719921 1.793408 YAL018C = 0.05573 + -0.30339 IME1 + 0.19509 CRZ1
estimated X vs observed Xestimated Y vs observed Y YOR383C(FIT3) 1.817131114 6.365737773 2.63725 YOR383C = 0.36746 + -0.28777 ARG81 + -0.46434 ECM22 + 0.41289 GLN3 + -0.33583 MAC1
estimated X vs observed Xestimated Y vs observed Y YOR319W(HSH49) 2.173719933 5.652560133 4.924085 YOR319W = 0.83017 + -1.13009 CIN5 + -0.65535 FHL1 + 0.35423 DAL81 + -0.27542 FKH1
estimated X vs observed Xestimated Y vs observed Y YOR264W(DSE3) 2.260838202 -0.521676403 5.556256 YOR264W = -0.05978 + 0.12944 ARG80
estimated X vs observed Xestimated Y vs observed Y YOL116W(MSN1) 2.296800252 -0.593600504 3.76932 YOL116W = -0.09218 + 0.19347 HAL9
estimated X vs observed Xestimated Y vs observed Y YGR269W(NA) 2.403706822 -0.807413645 5.190481 YGR269W = 0.09716 + -0.19437 HMS1
estimated X vs observed Xestimated Y vs observed Y YKL001C(MET14) 2.57790152 -1.155803041 4.335899 YKL001C = 0.09125 + -0.1858 IME1
estimated X vs observed Xestimated Y vs observed Y YDL117W(CYK3) 2.588417066 -1.176834133 4.345608 YDL117W = -0.16278 + 0.35936 AFT2
estimated X vs observed Xestimated Y vs observed Y YKL185W(ASH1) 2.635817832 2.728364336 2.369025 YKL185W = -0.15065 + 0.40758 ACE2 + -0.42122 GAT1 + 0.30234 INO2
estimated X vs observed Xestimated Y vs observed Y YBR158W(AMN1) 2.651724164 8.696551671 1.204478 YBR158W = -0.13977 + 0.92629 KRE33 + -0.94125 IME4 + 0.57177 MAL13 + 0.26451 GAT3 + -0.34763 CBF1 + -0.28588 AZF1
estimated X vs observed Xestimated Y vs observed Y YBR108W(NA) 2.663816436 -1.327632871 2.853804 YBR108W = 0.11291 + -0.20506 HAC1
estimated X vs observed Xestimated Y vs observed Y YAL020C(ATS1) 2.753961519 -1.507923038 4.152434 YAL020C = -0.13309 + 0.25698 ASK10
estimated X vs observed Xestimated Y vs observed Y YBR002C(RER2) 3.06818726 -2.13637452 2.256158 YBR002C = 0.10169 + -0.2022 HAP5
estimated X vs observed Xestimated Y vs observed Y YCL040W(GLK1) 3.091413666 -2.182827333 3.17787 YCL040W = 0.09509 + -0.19975 HAL9
estimated X vs observed Xestimated Y vs observed Y YNL192W(CHS1) 3.212904304 1.574191393 2.128342 YNL192W = -0.11579 + 0.11558 FZF1 + 0.3067 DAL81 + -0.20912 HMS2
estimated X vs observed Xestimated Y vs observed Y YBR230C(NA) 3.316947372 3.366105256 2.204332 YBR230C = -0.52083 + 0.48451 MAC1 + 0.46753 GZF3 + 0.37454 INO4 + -0.24411 EDS1
estimated X vs observed Xestimated Y vs observed Y YNL018C(NA) 3.587721964 -3.175443928 2.194675 YNL018C = 0.07851 + -0.15429 ARG81

Fitted values of transcript rate of target gene =

where f(.) is the sigmoid function denoted in equation (2) in our paper, and are estimated parameters by the algorithms.

 

GRAPHICS