OTHER GENES

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You may click on the icons in each table row to view the specific graph for that target gene ( clicking the blue icon will open up the estimated X v.s. observed X image), or go to the Graphics section to view graphics in slideshow. Click on the yellow icon to see further explanations for definitions.

SUMMARY

 
Target ORF ( Gene Symbol )
log L
AIC

SSE
(sum of squre errors)

Fitted Equation Explanation
(Target = C0 + C1 regulator 1 + .... Cn regulator n)

estimated X vs observed X YJL194W(CDC6) 6.720682 -7.44136 3.615421 YJL194W = -0.03241 + 0.30789 CUP9 + -0.19961 HOG1
estimated X vs observed X YBR088C(POL30) 15.08427 -14.1685 0.087892 YBR088C = -0.09092 + 0.05431 CIN5 + 0.33101 HAA1 + -0.12861 GAT3 + -0.37056 HMS2 + 0.25651 ECM22 + 0.15345 IME4 + -0.08411 GCR2
estimated X vs observed X YOL094C(RFC4) 15.83365 -27.6673 0.587835 YOL094C = 0.0649 + -0.14612 AFT2
estimated X vs observed X YDL102W(CDC2) 12.16054 -20.3211 1.058135 YDL102W = -0.0983 + 0.20068 CST6
estimated X vs observed X YGR188C(BUB1) 13.726 -21.452 0.7876 YGR188C = -0.00155 + 0.15442 HAP1 + -0.14407 GTS1
estimated X vs observed X YAL040C(CLN3) 13.33051 -16.661 0.506329 YAL040C = -0.08494 + 0.47174 FHL1 + -0.3435 HOG1 + -0.1071 CAD1 + 0.14793 INO4
estimated X vs observed X YMR199W(CLN1) 11.39911 -10.7982 0.401114 YMR199W = -0.05825 + 0.61122 CIN5 + -0.34793 ABF1 + -0.15943 ARG81 + -0.18982 HMS2 + 0.24647 IXR1
estimated X vs observed X YPL256C(CLN2) 22.593 -23.186 0.001819 YPL256C = -0.91519 + -0.02988 FHL1 + 0.16169 MAL33 + 0.77391 IFH1 + 0.55934 ASH1 + 0.21347 GCR1 + 0.13726 HAP1 + 0.1737 HAC1 + -0.16032 HAA1 + 0.07826 MAL13 + -0.03232 AZF1
estimated X vs observed X YGL003C(CDH1) 26.57811 -49.1562 0.257352 YGL003C = 0.03427 + -0.07111 CST6
estimated X vs observed X YDR146C(SWI5) 22.93427 -35.8685 0.17984 YDR146C = 0.03263 + -0.2228 FZF1 + 0.25169 GAL80 + -0.21418 ARR1 + 0.15809 GCN4
estimated X vs observed X YGL116W(CDC20) 12.23794 -16.4759 0.669279 YGL116W = -0.09569 + 0.21693 FHL1 + -0.12542 HIR2 + 0.1046 ARG80
estimated X vs observed X YFR028C(CDC14) 18.11288 -28.2258 0.267917 YFR028C = -0.04222 + 0.16479 LEU3 + -0.16862 AFT2 + 0.08549 HAL9
estimated X vs observed X YPR120C(CLB5) 11.33536 -14.6707 0.568684 YPR120C = -0.1329 + 0.31391 IFH1 + -0.17278 GAL80 + 0.1504 HAP1
estimated X vs observed X YGR109C(CLB6) 9.453229 -2.90646 0.278955 YGR109C = -0.3573 + 0.41769 IFH1 + 0.38707 CST6 + 0.10134 GAL4 + 0.15977 DIG1 + -0.25757 GLN3 + -0.24305 HAL9 + 0.1655 GCN4
estimated X vs observed X YLR079W(SIC1) 7.146562 -8.29312 2.284497 YLR079W = 0.01263 + 0.15174 CAD1 + -0.16774 GAT1
estimated X vs observed X YGR108W(CLB1) 13.72401 -17.448 0.31334 YGR108W = 0.17743 + -0.24937 INO2 + -0.06648 CHA4 + 0.15101 HAP2 + -0.13494 ACE2
estimated X vs observed X YPR119W(CLB2) 11.00256 -14.0051 1.627608 YPR119W = -0.02286 + -0.38636 BAS1 + 0.30969 HMS1 + 0.17298 DAL82
estimated X vs observed X YMR043W(MCM1) 20.29635 -24.5927 0.052609 YMR043W = -0.11394 + 0.53446 LEU3 + 0.23611 HIR3 + 0.02032 DAT1 + -0.36177 FHL1 + -0.16318 FAP7 + -0.17294 MAC1 + 0.12213 CBF1

Fitted values of transcript rate of target gene =

where f(.) is the sigmoid function denoted in equation (2) in our paper, and are estimated parameters by the algorithms.

 

GRAPHICS