BSCHEN'S 20 GENES

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You may click on the icons in each table row to view the specific graph for that target gene ( clicking the blue icon will open up the estimated X v.s. observed X image, while the pink icon will open up the estimated Y v.s. observed Y image), or go to the Graphics section to view graphics in slideshow. Click on the yellow icon to see further explanations for definitions.

NOTE: The fitted equation is depicted in full-length in the summary table. However, when the equation is depicted in the graphic subtitle (in the Graphics section), the equation is shortened to display only the first two regulators (the remaining part replaced by "....").

SUMMARY

 
Target ORF ( Gene Symbol )
log L
AIC

SSE
(sum of squre errors)

Fitted EquationExplanation
(Target = C0 + C1 regulator 1 + .... Cn regulator n)
estimated X vs observed Xestimated Y vs observed Y YER111C(SWI4) 7.547674 -7.09535 1.324407 YER111C = -0.49257 + 0.59434 IFH1 + 0.26671 ASH1 + 0.17228 LEU3
estimated X vs observed Xestimated Y vs observed Y YPL256C(CLN2) 22.593 -23.186 0.001819 YPL256C = -0.91519 + -0.02988 FHL1 + 0.16169 MAL33 + 0.77391 IFH1 + 0.55934 ASH1 + 0.21347 GCR1 + 0.13726 HAP1 + 0.1737 HAC1 + -0.16032 HAA1 + 0.07826 MAL13 + -0.03232 AZF1
estimated X vs observed Xestimated Y vs observed Y YJL187C(SWE1) 19.39014 -28.7803 0.186025 YJL187C = 0.21353 + -0.21972 FHL1 + -0.2461 MAC1 + 0.19665 BAS1 + -0.13724 GZF3
estimated X vs observed Xestimated Y vs observed Y YCR065W(HCM1) 13.35261 -16.7052 0.276446 YCR065W = 0.15904 + -0.27837 ABF1 + 0.20475 CST6 + -0.13823 MAC1 + -0.0912 HMS2
estimated X vs observed Xestimated Y vs observed Y YOR372C(NDD1) 18.59885 -33.1977 1.032981 YOR372C = -0.04978 + 0.11715 ASK10
estimated X vs observed Xestimated Y vs observed Y YPL163C(SVS1) 10.04849 -6.09698 0.225252 YPL163C = 0.59935 + -0.65004 FHL1 + -0.21633 GAT3 + -0.24429 LEU3 + 0.19815 ACE2 + -0.147 ARG81 + -0.11096 GCR2
estimated X vs observed Xestimated Y vs observed Y YER001W(MNN1) 5.173357 -4.34671 3.979519 YER001W = 0.00389 + 0.31188 HAA1 + -0.28248 ABF1
estimated X vs observed Xestimated Y vs observed Y YGR109C(CLB6) 9.453229 -2.90646 0.278955 YGR109C = -0.3573 + 0.41769 IFH1 + 0.38707 CST6 + 0.10134 GAL4 + 0.15977 DIG1 + -0.25757 GLN3 + -0.24305 HAL9 + 0.1655 GCN4
estimated X vs observed Xestimated Y vs observed Y YDR225W(HTA1) 4.629755 -3.25951 2.691638 YDR225W = 0.17135 + -0.49454 DAT1 + 0.17579 GCR2
estimated X vs observed Xestimated Y vs observed Y YDR224C(HTB1) 13.25258 -16.5052 0.597384 YDR224C = 0.12997 + -0.17298 FAP7 + -0.37138 FKH1 + 0.14038 HAL9 + 0.16659 HSF1
estimated X vs observed Xestimated Y vs observed Y YBR010W(HHT1) 9.209776 -10.4196 1.111418 YBR010W = 0.05595 + -0.53201 FKH2 + 0.26247 CBF1 + 0.17509 HAL9
estimated X vs observed Xestimated Y vs observed Y YLR210W(CLB4) 9.764575 -15.5291 1.604086 YLR210W = 0.07389 + -0.14534 HMS1
estimated X vs observed Xestimated Y vs observed Y YPR119W(CLB2) 11.00256 -14.0051 1.627608 YPR119W = -0.02286 + -0.38636 BAS1 + 0.30969 HMS1 + 0.17298 DAL82
estimated X vs observed Xestimated Y vs observed Y YGL116W(CDC20) 12.23794 -16.4759 0.669279 YGL116W = -0.09569 + 0.21693 FHL1 + -0.12542 HIR2 + 0.1046 ARG80
estimated X vs observed Xestimated Y vs observed Y YHR152W(SPO12) 14.14396 -22.2879 1.287964 YHR152W = -0.02938 + 0.17236 GCR1 + -0.12528 INO4
estimated X vs observed Xestimated Y vs observed Y YDR146C(SWI5) 22.93427 -35.8685 0.17984 YDR146C = 0.03263 + -0.2228 FZF1 + 0.25169 GAL80 + -0.21418 ARR1 + 0.15809 GCN4
estimated X vs observed Xestimated Y vs observed Y YKL185W(ASH1) 2.635818 2.728364 2.369025 YKL185W = -0.15065 + 0.40758 ACE2 + -0.42122 GAT1 + 0.30234 INO2
estimated X vs observed Xestimated Y vs observed Y YLR079W(SIC1) 7.146562 -8.29312 2.284497 YLR079W = 0.01263 + 0.15174 CAD1 + -0.16774 GAT1
estimated X vs observed Xestimated Y vs observed Y YAL040C(CLN3) 13.33051 -16.661 0.506329 YAL040C = -0.08494 + 0.47174 FHL1 + -0.3435 HOG1 + -0.1071 CAD1 + 0.14793 INO4
estimated X vs observed Xestimated Y vs observed Y YLR274W(CDC46) 15.99668 -19.9934 0.31633 YLR274W = -0.30833 + 0.09239 ACE2 + 0.29637 IFH1 + 0.14175 GCR1 + 0.19699 AFT2 + -0.08051 GAT3

Fitted values of transcript rate of target gene =

where f(.) is the sigmoid function denoted in equation (2) in our paper, and are estimated parameters by the algorithms.

 

GRAPHICS