BEST 20 GENES

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You may click on the icons in each table row to view the specific graph for that target gene ( clicking the blue icon will open up the estimated X v.s. observed X image, while the pink icon will open up the estimated Y v.s. observed Y image), or go to the Graphics section to view graphics in slideshow. Click on the yellow icon to see further explanations for definitions.

NOTE: The fitted equation is depicted in full-length in the summary table. However, when the equation is depicted in the graphic subtitle (in the Graphics section), the equation is shortened to display only the first two regulators (the remaining part replaced by "....").

SUMMARY

X	Y	Target ORF ( symbol )	log L	AIC	SSE (sum of squre errors)	Fitted Equation (Target = C0 + C1 regulator 1 + .... Cn regulator n)
		YER150W(SPI1)	30.79968264	-43.59936529	0.001533547	YER150W = 0.07888 + 0.34802 IME4 + -0.3037 MAL33 + -0.11896 HOG1 + -0.1319 GLN3 + 0.05406 ASH1 + 0.04982 CST6 + -0.03875 IXR1 + -0.0204 HAL9
		YOR323C(PRO2)	30.08018411	-46.16036821	0.01311109	YOR323C = 0.00326 + 0.17763 HAP1 + -0.07807 CST6 + -0.09468 GAT3 + -0.04774 CUP9 + 0.05446 CBF1 + -0.02179 CAD1
		YKL177W(NA)	29.55350139	-51.10700279	0.1308164	YKL177W = -0.00133 + -0.16144 GAT3 + 0.08806 ARG81 + 0.0687 GAL80
		YMR288W(HSH155)	29.00189697	-42.00379395	0.01470676	YMR288W = 0.145 + -0.25086 ARG81 + 0.18777 CIN5 + -0.06782 DIG1 + -0.09072 GTS1 + -0.05316 DAL80 + 0.04604 CBF1 + -0.05324 ACA1
		YMR316W(DIA1)	28.70714638	-39.41429276	0.001995395	YMR316W = -0.00425 + -0.15095 HAP4 + -0.14588 LEU3 + 0.14882 FKH2 + 0.12768 AZF1 + -0.09171 ARO80 + 0.08784 MAL33 + 0.02933 HMS2 + -0.01814 GTS1
		YPL223C(GRE1)	28.53068638	-43.06137277	0.0174106	YPL223C = -0.06471 + -0.24008 GAT3 + 0.14686 GAL80 + 0.13038 GLN3 + 0.08107 ARG81 + 0.06186 ASK10 + -0.04967 FZF1
		YPR035W(GLN1)	28.47988727	-40.95977454	0.01388449	YPR035W = 0.11686 + 0.20839 DIG1 + -0.14886 HMS2 + -0.07803 IME1 + -0.06501 GTS1 + -0.07533 GAL3 + -0.04652 HIR1 + -0.03328 CST6
		YER003C(PMI40)	28.33639897	-44.67279793	0.02463749	YER003C = -0.09622 + 0.17483 MAL33 + 0.08502 BYE1 + 0.08661 INO4 + -0.06853 GCR2 + -0.06533 IFH1
		YJL155C(FBP26)	28.24730676	-44.49461352	0.04968537	YJL155C = 0.12671 + -0.16212 GAT3 + -0.18688 HAC1 + 0.08825 FKH1 + -0.06357 AFT2 + 0.059 CBF1
		YMR145C(NDE1)	28.22292802	-46.44585603	0.1193788	YMR145C = 0.07163 + -0.13913 CST6 + -0.13826 BYE1 + 0.08235 FKH2 + 0.05507 FZF1
		YAL047C(SPC72)	28.18355631	-44.36711262	0.05258684	YAL047C = -0.05443 + 0.19474 HAP1 + -0.21413 CAD1 + 0.18519 ACE2 + -0.09284 GCR2 + 0.04528 CRZ1
		YNL231C(PDR16)	28.15300379	-44.30600757	0.08591658	YNL231C = 0.03376 + 0.18078 HAA1 + -0.15699 CIN5 + -0.07757 HOG1 + -0.05041 HAP3 + 0.04987 ACA1
		YCR034W(FEN1)	28.11491034	-48.22982068	0.02579116	YCR034W = -0.04283 + 0.07275 MAL33 + 0.09566 EDS1 + -0.07398 DIG1
		YNL068C(FKH2)	27.97621497	-49.95242995	0.106962	YNL068C = 0.12045 + -0.13738 CHA4 + -0.09698 IFH1
		YBR126C(TPS1)	27.91993486	-43.83986971	0.09592392	YBR126C = -0.16532 + 0.4206 CUP9 + -0.3046 DAL82 + 0.29458 HAL9 + -0.16262 AZF1 + 0.07302 INO2
		YPL231W(FAS2)	27.64499566	-41.28999132	0.01381624	YPL231W = 0.20777 + -0.18167 IME4 + -0.17549 HIR1 + 0.10778 GCN4 + -0.15147 IFH1 + -0.07384 EDS1 + 0.04783 HAP3
		YAR033W(MST28)	27.57575956	-43.15151912	0.0283441	YAR033W = 0.09683 + 0.07889 HSF1 + -0.14898 HAP4 + -0.04914 CHA4 + -0.06152 EDS1 + -0.03701 HAP1
		YBR237W(PRP5)	27.53943283	-41.07886565	0.01579758	YBR237W = -0.23762 + 0.15799 CUP9 + 0.33867 HAC1 + 0.18783 GAL3 + -0.20276 HSF1 + -0.06688 MAL13 + 0.05186 HOG1
		YOR084W(NA)	27.37527644	-42.75055288	0.06660599	YOR084W = 0.0415 + -0.29895 DAT1 + 0.10211 ACA1 + 0.10802 ACE2 + 0.08279 CRZ1 + -0.0573 HAP1
		YLR169W(NA)	27.2995507	-46.59910139	0.06101272	YLR169W = -0.02085 + 0.28385 HAP2 + -0.1317 FKH1 + -0.09632 HMS2

Fitted values of transcript rate of target gene =

where f(.) is the sigmoid function denoted in equation (2) in our paper, and are estimated parameters by the algorithms.

 

GRAPHICS